IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3093	 46.19	0	3808223..3808930	-	235	157962923	-	Spea_3106	-	2OG-Fe(II) oxygenase
3094	 45.49	0	3809096..3810370	+	424	157962924	-	Spea_3107	-	rRNA (guanine-N(2)-)-methyltransferase
3095	 43.78	0	3810468..3811415	-	315	157962925	-	Spea_3108	-	fatty acid hydroxylase
3096	 45.07	0	3811523..3812587	-	354	157962926	-	Spea_3109	-	hypothetical protein
3097	 44.72	0	3812826..3813431	+	201	157962927	-	Spea_3110	-	hypothetical protein
3098	 44.70	0	3813481..3814140	+	219	157962928	-	Spea_3111	-	peptidyl-prolyl cis-trans isomerase cyclophilin type
3099	 44.86	0	3814259..3814579	+	106	157962929	-	Spea_3112	-	hypothetical protein
3100	 45.21	0	3815049..3816479	+	476	157962930	-	Spea_3113	-	major facilitator transporter
3101	 43.21	0	3816716..3817201	-	161	157962931	-	Spea_3114	-	nucleotide-binding protein
3102	 41.03	-1	3817303..3817731	+	142	157962932	-	Spea_3115	-	VanZ family protein
3103	 47.29	0	3817738..3818769	+	343	157962933	-	Spea_3116	-	2-dehydropanto