version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3089 47.58 0 3803803..3805002 - 399 157962919 - Spea_3102 - Na(+)-translocating NADH-quinone reductase subunit B 3090 45.39 0 3805002..3806336 - 444 157962920 - Spea_3103 - Na(+)-translocating NADH-quinone reductase subunit A 3091 44.51 0 3806980..3807489 - 169 157962921 - Spea_3104 - S-ribosylhomocysteinase 3092 45.33 0 3807802..3808101 - 99 157962922 - Spea_3105 - BolA family protein 3093 46.19 0 3808223..3808930 - 235 157962923 - Spea_3106 - 2OG-Fe(II) oxygenase 3094 45.49 0 3809096..3810370 + 424 157962924 - Spea_3107 - rRNA (guanine-N(2)-)-methyltransferase 3095 43.78 0 3810468..3811415 - 315 157962925 - Spea_3108 - fatty acid hydroxylase 3096 45.07 0 3811523..3812587 - 354 157962926 - Spea_3109 - hypothetical protein 3097 44.72 0 3812826..3813431 + 201 157962927 - Spea_3110 - hypothetical protein 3098 44.70 0 3813481..3814140 + 219 157962928 - Spea_3111 - peptidyl-prolyl cis-trans isomerase cyclophilin type 3099 44.86 0 3814259..3814579 + 106 157962929 - Spea_3112 - hypothetical protein 3100 45.21 0 3815049..3816479 + 476 157962930 - Spea_3113 - major facilitator transporter 3101 43.21 0 3816716..3817201 - 161 157962931 - Spea_3114 - nucleotide-binding protein 3102 41.03 -1 3817303..3817731 + 142 157962932 - Spea_3115 - VanZ family protein 3103 47.29 0 3817738..3818769 + 343 157962933 - Spea_3116 - 2-dehydropantoate 2-reductase 3104 47.33 0 3818940..3820439 + 499 157962934 - Spea_3117 - sodium:neurotransmitter symporter 3105 46.33 0 3820639..3821346 + 235 157962935 - Spea_3118 - phosphoesterase PA-phosphatase related 3106 46.58 0 3821350..3822225 - 291 157962936 - Spea_3119 - hypothetical protein 3107 46.26 0 3822410..3823972 - 520 157962937 - Spea_3120 - AbgT putative transporter 3108 46.29 0 3824190..3825038 - 282 157962938 - Spea_3121 - 2-dehydro-3-deoxyphosphooctonate aldolase 3109 45.86 0 3825108..3826376 - 422 157962939 - Spea_3122 - hypothetical protein 3110 43.98 0 3826590..3827378 - 262 157962940 - Spea_3123 - hypothetical protein 3111 41.16 -1 3827378..3827773 - 131 157962941 - Spea_3124 - invasion gene expression up-regulator SirB 3112 45.31 0 3828059..3828901 - 280 157962942 - Spea_3125 - HemK family modification methylase 3113 46.41 0 3828949..3830034 - 361 157962943 - Spea_3126 - peptide chain release factor 1 3114 45.00 0 3830048..3831298 - 416 157962944 - Spea_3127 - glutamyl-tRNA reductase 3115 46.52 0 3831568..3832227 + 219 157962945 - Spea_3128 - outer membrane lipoprotein LolB 3116 46.78 0 3832224..3833078 + 284 157962946 - Spea_3129 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 3117 45.64 0 3833116..3834090 + 324 157962947 - Spea_3130 - ribose-phosphate pyrophosphokinase 3118 42.25 0 3834174..3834599 - 141 157962948 - Spea_3131 - hypothetical protein 3119 41.97 0 3834636..3835052 - 138 157962949 - Spea_3132 - hypothetical protein 3120 45.05 0 3837555..3838646 - 363 157962950 - Spea_3133 - translation-associated GTPase 3121 46.09 0 3838700..3839326 - 208 157962951 - Spea_3134 - peptidyl-tRNA hydrolase 3122 47.33 0 3839549..3840748 - 399 157962952 - Spea_3135 - UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 3123 46.03 0 3841058..3841372 + 104 157962953 - Spea_3136 - hypothetical protein 3124 44.47 0 3841468..3842895 + 475 157962954 - Spea_3137 - tRNA-i(6)A37 thiotransferase enzyme MiaB 3125 46.78 0 3843057..3844097 + 346 157962955 - Spea_3138 - PhoH family protein 3126 43.10 0 3844090..3844560 + 156 157962956 - Spea_3139 - putative metalloprotease 3127 44.44 0 3844588..3845469 + 293 157962957 - Spea_3140 - CBS domain-containing protein 3128 48.89 +1 3845509..3847044 + 511 157962958 - Spea_3141 - apolipoprotein N-acyltransferase 3129 42.91 0 3847216..3847716 - 166 157962959 - Spea_3142 - hypothetical protein 3130 45.99 0 3847810..3850416 + 868 157962960 - Spea_3143 - leucyl-tRNA synthetase 3131 49.09 +1 3850449..3850943 + 164 157962961 - Spea_3144 - rare lipoprotein B 3132 47.19 0 3850943..3851974 + 343 157962962 - Spea_3145 - DNA polymerase III, delta subunit 3133 47.31 0 3851974..3852624 + 216 157962963 - Spea_3146 - nicotinate (nicotinamide) nucleotide adenylyltransferase 3134 41.82 -1 3852723..3853052 + 109 157962964 - Spea_3147 - iojap-like protein 3135 47.13 0 3853052..3853522 + 156 157962965 - Spea_3148 - SPOUT methyltransferase superfamily protein 3136 46.53 0 3853607..3855463 + 618 157962966 - Spea_3149 - peptidoglycan glycosyltransferase 3137 48.33 0 3855460..3856566 + 368 157962967 - Spea_3150 - rod shape-determining protein RodA 3138 44.34 0 3856668..3857666 + 332 157962968 - Spea_3151 - lytic murein transglycosylase B 3139 47.38 0 3857653..3858435 + 260 157962969 - Spea_3152 - rare lipoprotein A 3140 44.16 0 3858541..3859713 + 390 157962970 - Spea_3153 - Serine-type D-Ala-D-Ala carboxypeptidase 3141 41.95 0 3859846..3860112 + 88 157962971 - Spea_3154 - hypothetical protein 3142 45.61 0 3860207..3860866 + 219 157962972 - Spea_3155 - lipoate-protein ligase B 3143 46.48 0 3860859..3861824 + 321 157962973 - Spea_3156 - lipoyl synthase 3144 44.75 0 3861920..3862357 - 145 157962974 - Spea_3157 - ribosomal-protein-alanine acetyltransferase 3145 46.26 0 3862357..3862704 - 115 157962975 - Spea_3158 - hypothetical protein 3146 43.03 0 3863366..3864334 - 322 157962976 - Spea_3159 - hydrolase (secreted protein) 3147 44.07 0 3864623..3864976 - 117 157962977 - Spea_3160 - hypothetical protein 3148 42.08 0 3865578..3866594 + 338 157962978 - Spea_3161 - transposase IS116/IS110/IS902 family protein 3149 43.09 0 3872842..3873405 + 187 157962979 - Spea_3162 - hypothetical protein 3150 40.98 -1 3873495..3873821 - 108 157962980 - Spea_3163 - hypothetical protein 3151 46.11 0 3874215..3876788 - 857 157962981 - Spea_3164 - ATPase 3152 45.38 0 3877014..3877760 - 248 157962982 - Spea_3165 - hypothetical protein 3153 45.58 0 3877760..3878731 - 323 157962983 - Spea_3166 - RluA family pseudouridine synthase 3154 40.52 -1 3878809..3879615 + 268 157962984 - Spea_3167 - putative lipoprotein 3155 44.29 0 3879732..3881903 - 723 157962985 - Spea_3168 - exporter of the RND superfamily protein-like protein 3156 46.86 0 3882417..3884279 - 620 157962986 - Spea_3169 - methyl-accepting chemotaxis sensory transducer 3157 48.52 +1 3884520..3885467 + 315 157962987 - Spea_3170 - ornithine cyclodeaminase 3158 49.82 +1 3885702..3886247 + 181 157962988 - Spea_3171 - ECF subfamily RNA polymerase sigma-24 factor 3159 44.57 0 3886240..3886782 + 180 157962989 - Spea_3172 - hypothetical protein 3160 44.69 0 3886779..3887720 + 313 157962990 - Spea_3173 - hypothetical protein 3161 37.54 -2 3887808..3888710 - 300 157962991 - Spea_3174 - LysR family transcriptional regulator 3162 47.03 0 3889157..3894106 + 1649 157962992 - Spea_3175 - peptidase S8 and S53 subtilisin kexin sedolisin 3163 45.89 0 3894376..3895068 - 230 157962993 - Spea_3176 - pseudouridine synthase 3164 48.20 0 3895472..3897556 + 694 157962994 - Spea_3177 - endothelin-converting protein 1 3165 46.18 0 3897948..3898733 + 261 157962995 - Spea_3178 - hypothetical protein 3166 44.20 0 3899146..3899550 + 134 157962996 - Spea_3179 - hypothetical protein 3167 44.71 0 3899615..3900115 + 166 157962997 - Spea_3180 - hypothetical protein 3168 49.52 +1 3900419..3901042 - 207 157962998 - Spea_3181 - glutathione S-transferase domain-containing protein 3169 44.51 0 3901284..3901820 + 178 157962999 - Spea_3182 - membrane-flanked domain-containing protein 3170 47.87 0 3901981..3903129 + 382 157963000 - Spea_3183 - putative manganese transporter 3171 46.67 0 3903154..3904323 + 389 157963001 - Spea_3184 - beta-lactamase 3172 41.77 -1 3904421..3904894 + 157 157963002 - Spea_3185 - hypothetical protein 3173 49.26 +1 3905579..3907267 + 562 157963003 - Spea_3186 - malate dehydrogenase 3174 47.84 0 3907475..3908053 - 192 157963004 - Spea_3187 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3175 48.83 +1 3908137..3910407 - 756 157963005 - Spea_3188 - molybdopterin oxidoreductase 3176 39.71 -1 3911023..3911226 - 67 157963006 - Spea_3189 - hypothetical protein 3177 45.19 0 3911915..3912403 - 162 157963007 - Spea_3190 - hypothetical protein 3178 47.81 0 3912433..3912957 - 174 157963008 - Spea_3191 - phosphoesterase PA-phosphatase related 3179 44.43 0 3913143..3915026 + 627 157963009 - Spea_3192 - diguanylate cyclase 3180 43.63 0 3915263..3917146 + 627 157963010 - Spea_3193 - diguanylate cyclase 3181 48.77 +1 3917264..3918487 + 407 157963011 - Spea_3194 - putative iron-sulfur cluster binding protein 3182 43.19 0 3918554..3918766 - 70 157963012 - Spea_3195 - hypothetical protein 3183 44.84 0 3918930..3919433 - 167 157963013 - Spea_3196 - alkylhydroperoxidase 3184 47.32 0 3919563..3920456 + 297 157963014 - Spea_3197 - LysR family transcriptional regulator 3185 46.74 0 3920537..3921103 - 188 157963015 - Spea_3198 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 3186 43.13 0 3921090..3921824 - 244 157963016 - Spea_3199 - DSBA oxidoreductase 3187 47.76 0 3921955..3924012 - 685 157963017 - Spea_3200 - cytochrome c biogenesis protein transmembrane region 3188 47.73 0 3924231..3924626 - 131 157963018 - Spea_3201 - hypothetical protein 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0