IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3086	 43.19	0	3801770..3802378	-	202	157962916	-	Spea_3099	-	Na(+)-translocating NADH-quinone reductase subunit E
3087	 42.97	0	3802384..3803016	-	210	157962917	-	Spea_3100	-	Na(+)-translocating NADH-quinone reductase subunit D
3088	 42.64	0	3803016..3803810	-	264	157962918	-	Spea_3101	-	Na(+)-translocating NADH-quinone reductase subunit C
3089	 47.58	0	3803803..3805002	-	399	157962919	-	Spea_3102	-	Na(+)-translocating NADH-quinone reductase subunit B
3090	 45.39	0	3805002..3806336	-	444	157962920	-	Spea_3103	-	Na(+)-translocating NADH-quinone reductase subunit A
3091	 44.51	0	3806980..3807489	-	169	157962921	-	Spea_3104	-	S-ribosylhomocysteinase
3092	 45.33	0	3807802..3808101	-	99	157962922	-	Spea_3105	-	BolA family protein
3093	 46.19	0	3808223..3808930	-	235	157962923	-	Spea_3106	-	2OG-Fe(II) oxygenase
3094	 45.49	0	3809096..3810370	+	424	157962924	-	Spea_3107	-	rRNA (guanine-N(2)-)-methyltransferase
3095	 43.78	0	3810468..3811415	-	315	157962925	-	Spea_3108	-	fatty acid hydroxylase
3096	 45.07	0	3811523..3812587	-	354