IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3078	 47.43	0	3794531..3795991	+	486	157962908	-	Spea_3091	-	aminoacyl-histidine dipeptidase
3079	 46.61	0	3796092..3797168	-	358	157962909	-	Spea_3092	-	DNA polymerase IV
3080	 44.58	0	3797424..3797663	-	79	157962910	-	Spea_3093	-	hypothetical protein
3081	 43.16	0	3797913..3798380	-	155	157962911	-	Spea_3094	-	bacterioferritin
3082	 41.24	-1	3798393..3798860	-	155	157962912	-	Spea_3095	-	bacterioferritin
3083	 44.14	0	3799195..3799416	-	73	157962913	-	Spea_3096	-	hypothetical protein
3084	 44.25	0	3799429..3800445	-	338	157962914	-	Spea_3097	-	ApbE family lipoprotein
3085	 44.71	0	3800475..3801722	-	415	157962915	-	Spea_3098	-	Na(+)-translocating NADH-quinone reductase subunit F
3086	 43.19	0	3801770..3802378	-	202	157962916	-	Spea_3099	-	Na(+)-translocating NADH-quinone reductase subunit E
3087	 42.97	0	3802384..3803016	-	210	157962917	-	Spea_3100	-	Na(+)-translocating NADH-quinone reductase subunit D
3088	 42.64	0	3803016..3803810	-	264	157962918</