IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3073	 47.99	0	3784284..3785402	-	372	157962903	-	Spea_3085	-	gamma-glutamyl kinase
3074	 48.06	0	3785671..3786960	-	429	157962904	-	Spea_3086	-	xanthine/uracil/vitamin C permease
3075	 39.77	-1	3787762..3789579	-	605	157962905	-	Spea_3087	-	ATP-dependent OLD family endonuclease
3076	 42.11	0	3791519..3791632	-	37	157962906	-	Spea_3089	-	hypothetical protein
3077	 49.90	+1	3792760..3794298	-	512	157962907	-	Spea_3090	-	peptidase M17 leucyl aminopeptidase domain-containing protein
3078	 47.43	0	3794531..3795991	+	486	157962908	-	Spea_3091	-	aminoacyl-histidine dipeptidase
3079	 46.61	0	3796092..3797168	-	358	157962909	-	Spea_3092	-	DNA polymerase IV
3080	 44.58	0	3797424..3797663	-	79	157962910	-	Spea_3093	-	hypothetical protein
3081	 43.16	0	3797913..3798380	-	155	157962911	-	Spea_3094	-	bacterioferritin
3082	 41.24	-1	3798393..3798860	-	155	157962912	-	Spea_3095	-	bacterioferritin
3083	 44.14	0	3799195..3799416	-	73	157962913	-	Spea_3096	-	hypothet