IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3069	 44.48	0	3780204..3781118	+	304	157962899	-	Spea_3081	-	hypothetical protein
3070	 43.62	0	3781169..3781897	-	242	157962900	-	Spea_3082	-	integrase catalytic region
3071	 41.41	-1	3782014..3782397	-	127	157962901	-	Spea_3083	-	transposase
3072	 48.34	0	3783022..3784287	-	421	157962902	-	Spea_3084	-	gamma-glutamyl phosphate reductase
3073	 47.99	0	3784284..3785402	-	372	157962903	-	Spea_3085	-	gamma-glutamyl kinase
3074	 48.06	0	3785671..3786960	-	429	157962904	-	Spea_3086	-	xanthine/uracil/vitamin C permease
3075	 39.77	-1	3787762..3789579	-	605	157962905	-	Spea_3087	-	ATP-dependent OLD family endonuclease
3076	 42.11	0	3791519..3791632	-	37	157962906	-	Spea_3089	-	hypothetical protein
3077	 49.90	+1	3792760..3794298	-	512	157962907	-	Spea_3090	-	peptidase M17 leucyl aminopeptidase domain-containing protein
3078	 47.43	0	3794531..3795991	+	486	157962908	-	Spea_3091	-	aminoacyl-histidine dipeptidase
3079	 46.61	0	3796092..3797168	-	358	157962909