IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3061	 43.19	0	3768827..3769303	-	158	157962891	-	Spea_3073	-	transcription elongation factor GreA
3062	 47.21	0	3769661..3772882	-	1073	157962892	-	Spea_3074	-	carbamoyl phosphate synthase large subunit
3063	 44.15	0	3772911..3774056	-	381	157962893	-	Spea_3075	-	carbamoyl phosphate synthase small subunit
3064	 47.64	0	3774250..3775074	-	274	157962894	-	Spea_3076	-	dihydrodipicolinate reductase
3065	 45.31	0	3775138..3775755	-	205	157962895	-	Spea_3077	-	peptidylprolyl isomerase FKBP-type
3066	 50.44	+1	3775838..3776638	-	266	157962896	-	Spea_3078	-	peptidase M48 Ste24p
3067	 48.36	0	3776761..3777891	-	376	157962897	-	Spea_3079	-	chaperone protein DnaJ
3068	 44.03	0	3777981..3779897	-	638	157962898	-	Spea_3080	-	chaperone protein DnaK
3069	 44.48	0	3780204..3781118	+	304	157962899	-	Spea_3081	-	hypothetical protein
3070	 43.62	0	3781169..3781897	-	242	157962900	-	Spea_3082	-	integrase catalytic region
3071	 41.41	-1	3782014..3782397	-	127	157962901