IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3054	 45.20	0	3761117..3761959	-	280	157962884	-	Spea_3066	-	dihydropteroate synthase
3055	 46.54	0	3762018..3763970	-	650	157962885	-	Spea_3067	-	ATP-dependent metalloprotease FtsH
3056	 47.30	0	3764031..3764660	-	209	157962886	-	Spea_3068	-	23S rRNA methyltransferase J
3057	 41.33	-1	3764754..3765053	+	99	157962887	-	Spea_3069	-	hypothetical protein
3058	 44.66	0	3765146..3766054	-	302	157962888	-	Spea_3070	-	protein-export membrane protein SecF
3059	 47.44	0	3766056..3767870	-	604	157962889	-	Spea_3071	-	preprotein translocase subunit SecD
3060	 45.31	0	3768172..3768672	-	166	157962890	-	Spea_3072	-	hypothetical protein
3061	 43.19	0	3768827..3769303	-	158	157962891	-	Spea_3073	-	transcription elongation factor GreA
3062	 47.21	0	3769661..3772882	-	1073	157962892	-	Spea_3074	-	carbamoyl phosphate synthase large subunit
3063	 44.15	0	3772911..3774056	-	381	157962893	-	Spea_3075	-	carbamoyl phosphate synthase small subunit
3064	 47.64	0	3774250..3775074	-	274