version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3051 42.86 0 3758364..3758699 - 111 157962881 - Spea_3063 - preprotein translocase subunit SecG 3052 44.57 0 3758701..3759483 - 260 157962882 - Spea_3064 - Triose-phosphate isomerase 3053 48.13 0 3759680..3761017 - 445 157962883 - Spea_3065 - phosphoglucosamine mutase 3054 45.20 0 3761117..3761959 - 280 157962884 - Spea_3066 - dihydropteroate synthase 3055 46.54 0 3762018..3763970 - 650 157962885 - Spea_3067 - ATP-dependent metalloprotease FtsH 3056 47.30 0 3764031..3764660 - 209 157962886 - Spea_3068 - 23S rRNA methyltransferase J 3057 41.33 -1 3764754..3765053 + 99 157962887 - Spea_3069 - hypothetical protein 3058 44.66 0 3765146..3766054 - 302 157962888 - Spea_3070 - protein-export membrane protein SecF 3059 47.44 0 3766056..3767870 - 604 157962889 - Spea_3071 - preprotein translocase subunit SecD 3060 45.31 0 3768172..3768672 - 166 157962890 - Spea_3072 - hypothetical protein 3061 43.19 0 3768827..3769303 - 158 157962891 - Spea_3073 - transcription elongation factor GreA 3062 47.21 0 3769661..3772882 - 1073 157962892 - Spea_3074 - carbamoyl phosphate synthase large subunit 3063 44.15 0 3772911..3774056 - 381 157962893 - Spea_3075 - carbamoyl phosphate synthase small subunit 3064 47.64 0 3774250..3775074 - 274 157962894 - Spea_3076 - dihydrodipicolinate reductase 3065 45.31 0 3775138..3775755 - 205 157962895 - Spea_3077 - peptidylprolyl isomerase FKBP-type 3066 50.44 +1 3775838..3776638 - 266 157962896 - Spea_3078 - peptidase M48 Ste24p 3067 48.36 0 3776761..3777891 - 376 157962897 - Spea_3079 - chaperone protein DnaJ 3068 44.03 0 3777981..3779897 - 638 157962898 - Spea_3080 - chaperone protein DnaK 3069 44.48 0 3780204..3781118 + 304 157962899 - Spea_3081 - hypothetical protein 3070 43.62 0 3781169..3781897 - 242 157962900 - Spea_3082 - integrase catalytic region 3071 41.41 -1 3782014..3782397 - 127 157962901 - Spea_3083 - transposase 3072 48.34 0 3783022..3784287 - 421 157962902 - Spea_3084 - gamma-glutamyl phosphate reductase 3073 47.99 0 3784284..3785402 - 372 157962903 - Spea_3085 - gamma-glutamyl kinase 3074 48.06 0 3785671..3786960 - 429 157962904 - Spea_3086 - xanthine/uracil/vitamin C permease 3075 39.77 -1 3787762..3789579 - 605 157962905 - Spea_3087 - ATP-dependent OLD family endonuclease 3076 42.11 0 3791519..3791632 - 37 157962906 - Spea_3089 - hypothetical protein 3077 49.90 +1 3792760..3794298 - 512 157962907 - Spea_3090 - peptidase M17 leucyl aminopeptidase domain-containing protein 3078 47.43 0 3794531..3795991 + 486 157962908 - Spea_3091 - aminoacyl-histidine dipeptidase 3079 46.61 0 3796092..3797168 - 358 157962909 - Spea_3092 - DNA polymerase IV 3080 44.58 0 3797424..3797663 - 79 157962910 - Spea_3093 - hypothetical protein 3081 43.16 0 3797913..3798380 - 155 157962911 - Spea_3094 - bacterioferritin 3082 41.24 -1 3798393..3798860 - 155 157962912 - Spea_3095 - bacterioferritin 3083 44.14 0 3799195..3799416 - 73 157962913 - Spea_3096 - hypothetical protein 3084 44.25 0 3799429..3800445 - 338 157962914 - Spea_3097 - ApbE family lipoprotein 3085 44.71 0 3800475..3801722 - 415 157962915 - Spea_3098 - Na(+)-translocating NADH-quinone reductase subunit F 3086 43.19 0 3801770..3802378 - 202 157962916 - Spea_3099 - Na(+)-translocating NADH-quinone reductase subunit E 3087 42.97 0 3802384..3803016 - 210 157962917 - Spea_3100 - Na(+)-translocating NADH-quinone reductase subunit D 3088 42.64 0 3803016..3803810 - 264 157962918 - Spea_3101 - Na(+)-translocating NADH-quinone reductase subunit C 3089 47.58 0 3803803..3805002 - 399 157962919 - Spea_3102 - Na(+)-translocating NADH-quinone reductase subunit B 3090 45.39 0 3805002..3806336 - 444 157962920 - Spea_3103 - Na(+)-translocating NADH-quinone reductase subunit A 3091 44.51 0 3806980..3807489 - 169 157962921 - Spea_3104 - S-ribosylhomocysteinase 3092 45.33 0 3807802..3808101 - 99 157962922 - Spea_3105 - BolA family protein 3093 46.19 0 3808223..3808930 - 235 157962923 - Spea_3106 - 2OG-Fe(II) oxygenase 3094 45.49 0 3809096..3810370 + 424 157962924 - Spea_3107 - rRNA (guanine-N(2)-)-methyltransferase 3095 43.78 0 3810468..3811415 - 315 157962925 - Spea_3108 - fatty acid hydroxylase 3096 45.07 0 3811523..3812587 - 354 157962926 - Spea_3109 - hypothetical protein 3097 44.72 0 3812826..3813431 + 201 157962927 - Spea_3110 - hypothetical protein 3098 44.70 0 3813481..3814140 + 219 157962928 - Spea_3111 - peptidyl-prolyl cis-trans isomerase cyclophilin type 3099 44.86 0 3814259..3814579 + 106 157962929 - Spea_3112 - hypothetical protein 3100 45.21 0 3815049..3816479 + 476 157962930 - Spea_3113 - major facilitator transporter 3101 43.21 0 3816716..3817201 - 161 157962931 - Spea_3114 - nucleotide-binding protein 3102 41.03 -1 3817303..3817731 + 142 157962932 - Spea_3115 - VanZ family protein 3103 47.29 0 3817738..3818769 + 343 157962933 - Spea_3116 - 2-dehydropantoate 2-reductase 3104 47.33 0 3818940..3820439 + 499 157962934 - Spea_3117 - sodium:neurotransmitter symporter 3105 46.33 0 3820639..3821346 + 235 157962935 - Spea_3118 - phosphoesterase PA-phosphatase related 3106 46.58 0 3821350..3822225 - 291 157962936 - Spea_3119 - hypothetical protein 3107 46.26 0 3822410..3823972 - 520 157962937 - Spea_3120 - AbgT putative transporter 3108 46.29 0 3824190..3825038 - 282 157962938 - Spea_3121 - 2-dehydro-3-deoxyphosphooctonate aldolase 3109 45.86 0 3825108..3826376 - 422 157962939 - Spea_3122 - hypothetical protein 3110 43.98 0 3826590..3827378 - 262 157962940 - Spea_3123 - hypothetical protein 3111 41.16 -1 3827378..3827773 - 131 157962941 - Spea_3124 - invasion gene expression up-regulator SirB 3112 45.31 0 3828059..3828901 - 280 157962942 - Spea_3125 - HemK family modification methylase 3113 46.41 0 3828949..3830034 - 361 157962943 - Spea_3126 - peptide chain release factor 1 3114 45.00 0 3830048..3831298 - 416 157962944 - Spea_3127 - glutamyl-tRNA reductase 3115 46.52 0 3831568..3832227 + 219 157962945 - Spea_3128 - outer membrane lipoprotein LolB 3116 46.78 0 3832224..3833078 + 284 157962946 - Spea_3129 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 3117 45.64 0 3833116..3834090 + 324 157962947 - Spea_3130 - ribose-phosphate pyrophosphokinase 3118 42.25 0 3834174..3834599 - 141 157962948 - Spea_3131 - hypothetical protein 3119 41.97 0 3834636..3835052 - 138 157962949 - Spea_3132 - hypothetical protein 3120 45.05 0 3837555..3838646 - 363 157962950 - Spea_3133 - translation-associated GTPase 3121 46.09 0 3838700..3839326 - 208 157962951 - Spea_3134 - peptidyl-tRNA hydrolase 3122 47.33 0 3839549..3840748 - 399 157962952 - Spea_3135 - UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 3123 46.03 0 3841058..3841372 + 104 157962953 - Spea_3136 - hypothetical protein 3124 44.47 0 3841468..3842895 + 475 157962954 - Spea_3137 - tRNA-i(6)A37 thiotransferase enzyme MiaB 3125 46.78 0 3843057..3844097 + 346 157962955 - Spea_3138 - PhoH family protein 3126 43.10 0 3844090..3844560 + 156 157962956 - Spea_3139 - putative metalloprotease 3127 44.44 0 3844588..3845469 + 293 157962957 - Spea_3140 - CBS domain-containing protein 3128 48.89 +1 3845509..3847044 + 511 157962958 - Spea_3141 - apolipoprotein N-acyltransferase 3129 42.91 0 3847216..3847716 - 166 157962959 - Spea_3142 - hypothetical protein 3130 45.99 0 3847810..3850416 + 868 157962960 - Spea_3143 - leucyl-tRNA synthetase 3131 49.09 +1 3850449..3850943 + 164 157962961 - Spea_3144 - rare lipoprotein B 3132 47.19 0 3850943..3851974 + 343 157962962 - Spea_3145 - DNA polymerase III, delta subunit 3133 47.31 0 3851974..3852624 + 216 157962963 - Spea_3146 - nicotinate (nicotinamide) nucleotide adenylyltransferase 3134 41.82 -1 3852723..3853052 + 109 157962964 - Spea_3147 - iojap-like protein 3135 47.13 0 3853052..3853522 + 156 157962965 - Spea_3148 - SPOUT methyltransferase superfamily protein 3136 46.53 0 3853607..3855463 + 618 157962966 - Spea_3149 - peptidoglycan glycosyltransferase 3137 48.33 0 3855460..3856566 + 368 157962967 - Spea_3150 - rod shape-determining protein RodA 3138 44.34 0 3856668..3857666 + 332 157962968 - Spea_3151 - lytic murein transglycosylase B 3139 47.38 0 3857653..3858435 + 260 157962969 - Spea_3152 - rare lipoprotein A 3140 44.16 0 3858541..3859713 + 390 157962970 - Spea_3153 - Serine-type D-Ala-D-Ala carboxypeptidase 3141 41.95 0 3859846..3860112 + 88 157962971 - Spea_3154 - hypothetical protein 3142 45.61 0 3860207..3860866 + 219 157962972 - Spea_3155 - lipoate-protein ligase B 3143 46.48 0 3860859..3861824 + 321 157962973 - Spea_3156 - lipoyl synthase 3144 44.75 0 3861920..3862357 - 145 157962974 - Spea_3157 - ribosomal-protein-alanine acetyltransferase 3145 46.26 0 3862357..3862704 - 115 157962975 - Spea_3158 - hypothetical protein 3146 43.03 0 3863366..3864334 - 322 157962976 - Spea_3159 - hydrolase (secreted protein) 3147 44.07 0 3864623..3864976 - 117 157962977 - Spea_3160 - hypothetical protein 3148 42.08 0 3865578..3866594 + 338 157962978 - Spea_3161 - transposase IS116/IS110/IS902 family protein 3149 43.09 0 3872842..3873405 + 187 157962979 - Spea_3162 - hypothetical protein 3150 40.98 -1 3873495..3873821 - 108 157962980 - Spea_3163 - hypothetical protein 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0