IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3051	 42.86	0	3758364..3758699	-	111	157962881	-	Spea_3063	-	preprotein translocase subunit SecG
3052	 44.57	0	3758701..3759483	-	260	157962882	-	Spea_3064	-	Triose-phosphate isomerase
3053	 48.13	0	3759680..3761017	-	445	157962883	-	Spea_3065	-	phosphoglucosamine mutase
3054	 45.20	0	3761117..3761959	-	280	157962884	-	Spea_3066	-	dihydropteroate synthase
3055	 46.54	0	3762018..3763970	-	650	157962885	-	Spea_3067	-	ATP-dependent metalloprotease FtsH
3056	 47.30	0	3764031..3764660	-	209	157962886	-	Spea_3068	-	23S rRNA methyltransferase J
3057	 41.33	-1	3764754..3765053	+	99	157962887	-	Spea_3069	-	hypothetical protein
3058	 44.66	0	3765146..3766054	-	302	157962888	-	Spea_3070	-	protein-export membrane protein SecF
3059	 47.44	0	3766056..3767870	-	604	157962889	-	Spea_3071	-	preprotein translocase subunit SecD
3060	 45.31	0	3768172..3768672	-	166	157962890	-	Spea_3072	-	hypothetical protein
3061	 43.19	0	3768827..3769303	-	158	157962891	-	Spea_3073