IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3038	 44.76	0	3741294..3742553	-	419	157962868	-	Spea_3050	-	nucleoside transporter
3039	 41.09	-1	3742733..3743506	-	257	157962869	-	Spea_3051	-	TatD-related deoxyribonuclease
3040	 41.38	-1	3743532..3743792	-	86	157962870	-	Spea_3052	-	hypothetical protein
3041	 45.48	0	3743934..3745514	-	526	157962871	-	Spea_3053	-	peptide chain release factor 3
3042	 44.52	0	3745676..3746569	-	297	157962872	-	Spea_3054	-	lipoprotein NlpI
3043	 44.87	0	3746741..3748855	-	704	157962873	-	Spea_3055	-	polynucleotide phosphorylase/polyadenylase
3044	 44.71	0	3749052..3751091	+	679	157962874	-	Spea_3056	-	diguanylate cyclase/phosphodiesterase
3045	 42.96	0	3751292..3751561	-	89	157962875	-	Spea_3057	-	30S ribosomal protein S15
3046	 44.73	0	3751683..3752630	-	315	157962876	-	Spea_3058	-	tRNA pseudouridine synthase B
3047	 44.76	0	3752630..3753058	-	142	157962877	-	Spea_3059	-	ribosome-binding factor A
3048	 46.15	0	3753125..3755815	-	896	157962878	-	Spea_3060	-	trans