IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3015	 48.59	+1	3711580..3712824	-	414	157962845	-	Spea_3027	-	DEAD/DEAH box helicase domain-containing protein
3016	 42.34	0	3712934..3713932	-	332	157962846	-	Spea_3028	-	amino acid ABC transporter periplasmic protein
3017	 47.00	0	3714085..3715350	+	421	157962847	-	Spea_3029	-	glyceraldehyde 3-phosphate dehydrogenase
3018	 42.46	0	3715510..3716079	+	189	157962848	-	Spea_3030	-	hypothetical protein
3019	 43.14	0	3716239..3716646	+	135	157962849	-	Spea_3031	-	type IV pilus assembly PilZ
3020	 45.92	0	3716761..3718134	-	457	157962850	-	Spea_3032	-	DNA repair protein RadA
3021	 45.29	0	3718285..3720702	+	805	157962851	-	Spea_3033	-	type IV pilus assembly PilZ
3022	 45.89	0	3720794..3721255	-	153	157962852	-	Spea_3034	-	hypothetical protein
3023	 46.58	0	3721676..3722407	+	243	157962853	-	Spea_3035	-	SNARE associated Golgi protein
3024	 41.99	0	3722797..3724632	-	611	157962854	-	Spea_3036	-	sulfatase
3025	 48.73	+1	3724874..3725821	-	315	157962855	-	S