IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3005	 46.42	0	3698270..3699988	+	572	157962835	-	Spea_3017	-	pseudouridine synthase
3006	 46.78	0	3700133..3700645	-	170	157962836	-	Spea_3018	-	sterol-binding domain-containing protein
3007	 48.50	+1	3700778..3701779	+	333	157962837	-	Spea_3019	-	peptidase U32
3008	 45.34	0	3701803..3702660	+	285	157962838	-	Spea_3020	-	peptidase U32
3009	 46.42	0	3703107..3704237	+	376	157962839	-	Spea_3021	-	S-(hydroxymethyl)glutathione dehydrogenase
3010	 41.56	-1	3704358..3705062	-	234	157962840	-	Spea_3022	-	hypothetical protein
3011	 45.31	0	3705427..3706971	+	514	157962841	-	Spea_3023	-	methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
3012	 44.25	0	3707330..3708685	+	451	157962842	-	Spea_3024	-	nucleoside recognition domain-containing protein
3013	 44.67	0	3708844..3709725	+	293	157962843	-	Spea_3025	-	metallophosphoesterase
3014	 49.08	+1	3709871..3711229	-	452	157962844	-	Spea_3026	-	xanthine/uracil/vitamin C permease
3015	 48.59	+1	3711580..3712824	-	414