IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2995	 41.95	0	3686870..3687310	-	146	157962825	-	Spea_3007	-	OsmC family protein
2996	 43.82	0	3687751..3688227	+	158	157962826	-	Spea_3008	-	thioesterase superfamily protein
2997	 44.29	0	3688340..3689818	-	492	157962827	-	Spea_3009	-	diguanylate cyclase/phosphodiesterase
2998	 46.03	0	3689943..3690785	-	280	157962828	-	Spea_3010	-	putative signal transduction protein
2999	 46.35	0	3691074..3692441	+	455	157962829	-	Spea_3011	-	peptidase U32
3000	 45.06	0	3692546..3693790	-	414	157962830	-	Spea_3012	-	carbohydrate-selective porin OprB
3001	 45.56	0	3693835..3694554	-	239	157962831	-	Spea_3013	-	hypothetical protein
3002	 47.10	0	3694964..3696343	-	459	157962832	-	Spea_3014	-	amidohydrolase
3003	 44.91	0	3696561..3697571	-	336	157962833	-	Spea_3015	-	AraC family transcriptional regulator
3004	 44.57	0	3697843..3698100	+	85	157962834	-	Spea_3016	-	4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
3005	 46.42	0	3698270..3699988	+	572	157962