IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2985	 49.93	+1	3672701..3674074	+	457	157962815	-	Spea_2997	-	hypothetical protein
2986	 47.37	0	3674079..3674648	+	189	157962816	-	Spea_2998	-	hypothetical protein
2987	 42.99	0	3674780..3675970	-	396	157962817	-	Spea_2999	-	TonB family protein
2988	 48.66	+1	3676168..3677544	-	458	157962818	-	Spea_3000	-	MATE efflux family protein
2989	 47.14	0	3677702..3678838	-	378	157962819	-	Spea_3001	-	cobalamin synthesis protein P47K
2990	 44.74	0	3678953..3679294	-	113	157962820	-	Spea_3002	-	hypothetical protein
2991	 44.47	0	3679577..3680995	+	472	157962821	-	Spea_3003	-	hypothetical protein
2992	 37.36	-2	3681118..3681465	-	115	157962822	-	Spea_3004	-	hypothetical protein
2993	 46.94	0	3681586..3682923	-	445	157962823	-	Spea_3005	-	DEAD/DEAH box helicase domain-containing protein
2994	 44.23	0	3683235..3686429	-	1064	157962824	-	Spea_3006	-	diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
2995	 41.95	0	3686870..3687310	-	146	157962825	-	Spea