IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2954	 46.34	0	3632720..3633634	+	304	157962784	-	Spea_2966	-	collagenase
2955	 45.16	0	3633722..3634693	-	323	157962785	-	Spea_2967	-	phosphate binding protein
2956	 46.36	0	3634896..3636215	-	439	157962786	-	Spea_2968	-	PAS/PAC sensor signal transduction histidine kinase
2957	 47.39	0	3636287..3636976	-	229	157962787	-	Spea_2969	-	two component transcriptional regulator
2958	 42.48	0	3637436..3638386	-	316	157962788	-	Spea_2970	-	porin
2959	 44.30	0	3638676..3639587	+	303	157962789	-	Spea_2971	-	recombination associated protein
2960	 46.12	0	3639647..3641452	-	601	157962790	-	Spea_2972	-	peptidase M61 domain-containing protein
2961	 42.22	0	3641580..3643751	+	723	157962791	-	Spea_2973	-	tetratricopeptide domain-containing protein
2962	 40.72	-1	3643872..3645428	+	518	157962792	-	Spea_2974	-	diguanylate cyclase
2963	 45.45	0	3645507..3646859	+	450	157962793	-	Spea_2975	-	hypothetical protein
2964	 46.43	0	3647092..3647862	+	256	157962794	-	Spea_297