IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2651	 44.81	0	3241610..3242524	+	304	157962481	-	Spea_2660	-	histone deacetylase superfamily protein
2652	 44.44	0	3242568..3242828	+	86	157962482	-	Spea_2661	-	hypothetical protein
2653	 43.08	0	3244655..3244972	-	105	157962483	-	Spea_2662	-	helix-hairpin-helix repeat-containing competence protein ComEA
2654	 44.95	0	3245360..3246754	+	464	157962484	-	Spea_2663	-	anion transporter
2655	 47.21	0	3246844..3248025	-	393	157962485	-	Spea_2664	-	cystathionine gamma-synthase
2656	 45.37	0	3248391..3249503	-	370	157962486	-	Spea_2665	-	hypothetical protein
2657	 45.37	0	3249524..3250969	-	481	157962487	-	Spea_2666	-	protein of unknown function DUF463 YcjX family protein
2658	 40.51	-1	3251046..3251435	-	129	157962488	-	Spea_2667	-	phage shock protein C, PspC
2659	 41.23	-1	3251503..3251730	-	75	157962489	-	Spea_2668	-	phage shock protein B
2660	 43.66	0	3251759..3252436	-	225	157962490	-	Spea_2669	-	phage shock protein A, PspA
2661	 46.96	0	3252614..3253714	+	366