IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2638	 41.35	-1	3223991..3225238	-	415	157962468	-	Spea_2647	-	tetratricopeptide domain-containing protein
2639	 45.09	0	3225241..3225861	-	206	157962469	-	Spea_2648	-	TonB family protein
2640	 44.69	0	3225863..3226267	-	134	157962470	-	Spea_2649	-	biopolymer transport protein ExbD/TolR
2641	 46.29	0	3226281..3226805	-	174	157962471	-	Spea_2650	-	MotA/TolQ/ExbB proton channel
2642	 44.32	0	3226805..3228160	-	451	157962472	-	Spea_2651	-	MotA/TolQ/ExbB proton channel
2643	 43.81	0	3228160..3228942	-	260	157962473	-	Spea_2652	-	hypothetical protein
2644	 43.27	0	3229718..3232564	-	948	157962474	-	Spea_2653	-	TonB-dependent receptor
2645	 42.24	0	3233401..3234612	-	403	157962475	-	Spea_2654	-	porin
2646	 45.79	0	3234846..3237245	-	799	157962476	-	Spea_2655	-	DNA polymerase II
2647	 46.45	0	3237346..3239418	+	690	157962477	-	Spea_2656	-	ATP-dependent DNA helicase DinG
2648	 45.48	0	3239427..3240200	+	257	157962478	-	Spea_2657	-	hypothetical protein
2649