IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2628	 44.64	0	3215044..3215883	-	279	157962458	-	Spea_2637	-	Beta-lactamase
2629	 46.41	0	3215899..3216678	-	259	157962459	-	Spea_2638	-	hypothetical protein
2630	 45.23	0	3216799..3217689	+	296	157962460	-	Spea_2639	-	LysR family transcriptional regulator
2631	 45.85	0	3217724..3219697	-	657	157962461	-	Spea_2640	-	serine/threonine protein kinase
2632	 44.70	0	3219813..3220199	-	128	157962462	-	Spea_2641	-	hypothetical protein
2633	 43.29	0	3220219..3220449	-	76	157962463	-	Spea_2642	-	RNA-binding S4 domain-containing protein
2634	 40.82	-1	3220520..3221053	-	177	157962464	-	Spea_2643	-	GCN5-related N-acetyltransferase
2635	 44.09	0	3221088..3221366	-	92	157962465	-	Spea_2644	-	PpiC-type peptidyl-prolyl cis-trans isomerase
2636	 44.24	0	3221500..3223332	-	610	157962466	-	Spea_2645	-	hypothetical protein
2637	 39.15	-1	3223402..3223917	+	171	157962467	-	Spea_2646	-	diguanylate cyclase
2638	 41.35	-1	3223991..3225238	-	415	157962468	-	Spea_2647	-	te