version 1.0
Shewanella pealeana ATCC 700345, complete genome - 1..5174581 4241 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2625 47.73 0 3207424..3208569 - 381 157962455 - Spea_2634 - nuclease SbcCD, D subunit 2626 47.00 0 3208916..3210166 + 416 157962456 - Spea_2635 - valine--pyruvate transaminase 2627 44.73 0 3210593..3214873 + 1426 157962457 - Spea_2636 - inner membrane lipoprotein 2628 44.64 0 3215044..3215883 - 279 157962458 - Spea_2637 - Beta-lactamase 2629 46.41 0 3215899..3216678 - 259 157962459 - Spea_2638 - hypothetical protein 2630 45.23 0 3216799..3217689 + 296 157962460 - Spea_2639 - LysR family transcriptional regulator 2631 45.85 0 3217724..3219697 - 657 157962461 - Spea_2640 - serine/threonine protein kinase 2632 44.70 0 3219813..3220199 - 128 157962462 - Spea_2641 - hypothetical protein 2633 43.29 0 3220219..3220449 - 76 157962463 - Spea_2642 - RNA-binding S4 domain-containing protein 2634 40.82 -1 3220520..3221053 - 177 157962464 - Spea_2643 - GCN5-related N-acetyltransferase 2635 44.09 0 3221088..3221366 - 92 157962465 - Spea_2644 - PpiC-type peptidyl-prolyl cis-trans isomerase 2636 44.24 0 3221500..3223332 - 610 157962466 - Spea_2645 - hypothetical protein 2637 39.15 -1 3223402..3223917 + 171 157962467 - Spea_2646 - diguanylate cyclase 2638 41.35 -1 3223991..3225238 - 415 157962468 - Spea_2647 - tetratricopeptide domain-containing protein 2639 45.09 0 3225241..3225861 - 206 157962469 - Spea_2648 - TonB family protein 2640 44.69 0 3225863..3226267 - 134 157962470 - Spea_2649 - biopolymer transport protein ExbD/TolR 2641 46.29 0 3226281..3226805 - 174 157962471 - Spea_2650 - MotA/TolQ/ExbB proton channel 2642 44.32 0 3226805..3228160 - 451 157962472 - Spea_2651 - MotA/TolQ/ExbB proton channel 2643 43.81 0 3228160..3228942 - 260 157962473 - Spea_2652 - hypothetical protein 2644 43.27 0 3229718..3232564 - 948 157962474 - Spea_2653 - TonB-dependent receptor 2645 42.24 0 3233401..3234612 - 403 157962475 - Spea_2654 - porin 2646 45.79 0 3234846..3237245 - 799 157962476 - Spea_2655 - DNA polymerase II 2647 46.45 0 3237346..3239418 + 690 157962477 - Spea_2656 - ATP-dependent DNA helicase DinG 2648 45.48 0 3239427..3240200 + 257 157962478 - Spea_2657 - hypothetical protein 2649 40.27 -1 3240197..3240859 + 220 157962479 - Spea_2658 - primosomal replication protein N'', putative 2650 45.85 0 3240869..3241579 + 236 157962480 - Spea_2659 - hypothetical protein 2651 44.81 0 3241610..3242524 + 304 157962481 - Spea_2660 - histone deacetylase superfamily protein 2652 44.44 0 3242568..3242828 + 86 157962482 - Spea_2661 - hypothetical protein 2653 43.08 0 3244655..3244972 - 105 157962483 - Spea_2662 - helix-hairpin-helix repeat-containing competence protein ComEA 2654 44.95 0 3245360..3246754 + 464 157962484 - Spea_2663 - anion transporter 2655 47.21 0 3246844..3248025 - 393 157962485 - Spea_2664 - cystathionine gamma-synthase 2656 45.37 0 3248391..3249503 - 370 157962486 - Spea_2665 - hypothetical protein 2657 45.37 0 3249524..3250969 - 481 157962487 - Spea_2666 - protein of unknown function DUF463 YcjX family protein 2658 40.51 -1 3251046..3251435 - 129 157962488 - Spea_2667 - phage shock protein C, PspC 2659 41.23 -1 3251503..3251730 - 75 157962489 - Spea_2668 - phage shock protein B 2660 43.66 0 3251759..3252436 - 225 157962490 - Spea_2669 - phage shock protein A, PspA 2661 46.96 0 3252614..3253714 + 366 157962491 - Spea_2670 - Fis family transcriptional regulator 2662 45.00 0 3253779..3255407 + 542 157962492 - Spea_2671 - extracellular solute-binding protein 2663 43.80 0 3255407..3256438 + 343 157962493 - Spea_2672 - binding-protein-dependent transport systems inner membrane component 2664 47.47 0 3256425..3257315 + 296 157962494 - Spea_2673 - binding-protein-dependent transport systems inner membrane component 2665 48.12 0 3257320..3258327 + 335 157962495 - Spea_2674 - oligopeptide/dipeptide ABC transporter, ATPase subunit 2666 41.98 0 3258308..3259093 + 261 157962496 - Spea_2675 - ABC transporter related 2667 46.30 0 3259273..3260475 + 400 157962497 - Spea_2676 - trans-2-enoyl-CoA reductase 2668 44.21 0 3261119..3262984 - 621 157962498 - Spea_2677 - PpiC-type peptidyl-prolyl cis-trans isomerase 2669 44.69 0 3263202..3263474 - 90 157962499 - Spea_2678 - histone family protein DNA-binding protein 2670 45.59 0 3263731..3266088 - 785 157962500 - Spea_2679 - ATP-dependent protease La 2671 44.91 0 3266237..3267514 - 425 157962501 - Spea_2680 - ATP-dependent protease ATP-binding subunit 2672 45.10 0 3267599..3268210 - 203 157962502 - Spea_2681 - ATP-dependent Clp protease proteolytic subunit 2673 45.13 0 3268300..3269604 - 434 157962503 - Spea_2682 - trigger factor 2674 45.85 0 3270626..3271480 + 284 157962504 - Spea_2683 - methylenetetrahydrofolate dehydrogenase (NADP(+)) 2675 45.58 0 3271676..3273055 - 459 157962505 - Spea_2684 - cysteinyl-tRNA synthetase 2676 42.63 0 3273368..3273862 + 164 157962506 - Spea_2685 - peptidyl-prolyl cis-trans isomerase cyclophilin type 2677 46.44 0 3273873..3274589 + 238 157962507 - Spea_2686 - UDP-2,3-diacylglucosamine hydrolase 2678 42.78 0 3274656..3275438 - 260 157962508 - Spea_2687 - tRNA--hydroxylase 2679 46.57 0 3275646..3276242 + 198 157962509 - Spea_2688 - hypothetical protein 2680 43.15 0 3276320..3277990 - 556 157962510 - Spea_2689 - glutaminyl-tRNA synthetase 2681 45.14 0 3278172..3280466 - 764 157962511 - Spea_2690 - ferrous iron transport protein B 2682 45.00 0 3280459..3280698 - 79 157962512 - Spea_2691 - FeoA family protein 2683 47.60 0 3281121..3282080 + 319 157962513 - Spea_2692 - cytochrome C family protein 2684 45.21 0 3282096..3284216 + 706 157962514 - Spea_2693 - outer membrane protein, putative 2685 49.35 +1 3284311..3286233 + 640 157962515 - Spea_2694 - decaheme cytochrome c MtrF 2686 48.80 +1 3286358..3288517 + 719 157962516 - Spea_2695 - decaheme cytochrome c 2687 45.61 0 3289024..3291492 + 822 157962517 - Spea_2696 - hypothetical protein 2688 44.59 0 3291948..3294185 + 745 157962518 - Spea_2697 - decaheme cytochrome c 2689 44.10 0 3294567..3296582 + 671 157962519 - Spea_2698 - decaheme cytochrome c 2690 49.04 +1 3296698..3297684 + 328 157962520 - Spea_2699 - cytochrome C family protein 2691 46.00 0 3297697..3299796 + 699 157962521 - Spea_2700 - outer membrane protein precursor MtrB 2692 44.56 0 3300658..3301236 + 192 157962522 - Spea_2701 - hypothetical protein 2693 48.92 +1 3301259..3301861 + 200 157962523 - Spea_2702 - hypothetical protein 2694 46.09 0 3302028..3303179 + 383 157962524 - Spea_2703 - transcriptional regulator, CdaR 2695 45.62 0 3303193..3303729 + 178 157962525 - Spea_2704 - type IV pilin, putative 2696 46.05 0 3303792..3304766 - 324 157962526 - Spea_2705 - OmpA/MotB domain-containing protein 2697 46.31 0 3304763..3305872 - 369 157962527 - Spea_2706 - hypothetical protein 2698 43.25 0 3305874..3306599 - 241 157962528 - Spea_2707 - hypothetical protein 2699 45.47 0 3306603..3309536 - 977 157962529 - Spea_2708 - hypothetical protein 2700 41.57 -1 3309533..3310066 - 177 157962530 - Spea_2709 - hypothetical protein 2701 48.36 0 3310103..3310681 - 192 157962531 - Spea_2710 - hypothetical protein 2702 43.58 0 3311107..3314004 - 965 157962532 - Spea_2711 - hypothetical protein 2703 41.94 0 3314328..3315257 - 309 157962533 - Spea_2712 - hypothetical protein 2704 47.76 0 3315554..3316912 + 452 157962534 - Spea_2713 - gluconate transporter 2705 50.22 +1 3317068..3318222 + 384 157962535 - Spea_2714 - glycerate kinase 2706 47.30 0 3318677..3320323 + 548 157962536 - Spea_2715 - pyridoxal-dependent decarboxylase 2707 44.36 0 3320424..3321974 - 516 157962537 - Spea_2716 - hypothetical protein 2708 38.26 -2 3322370..3323242 - 290 157962538 - Spea_2717 - AraC family transcriptional regulator 2709 37.90 -2 3323498..3323869 + 123 157962539 - Spea_2718 - hypothetical protein 2710 38.13 -2 3323983..3325482 - 499 157962540 - Spea_2719 - diguanylate cyclase 2711 40.42 -1 3325479..3326480 - 333 157962541 - Spea_2720 - basic membrane lipoprotein 2712 37.42 -2 3327746..3328504 + 252 157962542 - Spea_2721 - hypothetical protein 2713 40.64 -1 3328529..3329527 + 332 157962543 - Spea_2722 - hypothetical protein 2714 43.81 0 3329500..3330129 + 209 157962544 - Spea_2723 - hypothetical protein 2715 43.14 0 3330191..3331750 + 519 157962545 - Spea_2724 - lytic transglycosylase catalytic 2716 33.33 -2 3331771..3331941 + 56 157962546 - Spea_2725 - hypothetical protein 2717 42.01 0 3331944..3332681 + 245 157962547 - Spea_2726 - hypothetical protein 2718 49.60 +1 3332821..3334554 - 577 157962548 - Spea_2727 - phosphoglucomutase/phosphomannomutase alpha/beta/subunit 2719 44.77 0 3334779..3335696 + 305 157962549 - Spea_2728 - pseudouridine synthase 2720 40.89 -1 3335785..3336525 - 246 157962550 - Spea_2729 - cytochrome B561 2721 43.39 0 3336732..3337397 - 221 157962551 - Spea_2730 - glutathione S-transferase domain-containing protein 2722 42.05 0 3337602..3338450 + 282 157962552 - Spea_2731 - MscS mechanosensitive ion channel 2723 44.22 0 3338526..3338975 - 149 157962553 - Spea_2732 - hypothetical protein 2724 50.04 +1 3339271..3340413 - 380 157962554 - Spea_2733 - 3-beta hydroxysteroid dehydrogenase/isomerase 45.18 MEAN 3.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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