IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2597	 42.73	0	3174628..3175191	+	187	157962427	-	Spea_2606	-	RNA polymerase sigma factor
2598	 44.82	0	3175184..3175888	+	234	157962428	-	Spea_2607	-	hypothetical protein
2599	 45.87	0	3176029..3177480	+	483	157962429	-	Spea_2608	-	sodium/proline symporter
2600	 44.85	0	3177827..3179146	+	439	157962430	-	Spea_2609	-	membrane protein involved in aromatic hydrocarbon degradation
2601	 46.10	0	3179409..3180497	+	362	157962431	-	Spea_2610	-	RND family efflux transporter MFP subunit
2602	 47.49	0	3180533..3183817	+	1094	157962432	-	Spea_2611	-	acriflavin resistance protein
2603	 39.73	-1	3183878..3184096	+	72	157962433	-	Spea_2612	-	hypothetical protein
2604	 42.93	0	3184121..3184516	+	131	157962434	-	Spea_2613	-	rhodanese domain-containing protein
2605	 40.57	-1	3184657..3184974	+	105	157962435	-	Spea_2614	-	hypothetical protein
2606	 44.65	0	3185044..3185856	-	270	157962436	-	Spea_2615	-	hypothetical protein
2607	 43.49	0	3185955..3186584	-	209	157962437<