IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2573	 47.20	0	3143691..3145349	+	552	157962403	-	Spea_2582	-	peptidase M28
2574	 47.09	0	3146167..3147831	+	554	157962404	-	Spea_2583	-	asparagine synthetase B
2575	 50.29	+1	3147915..3148439	-	174	157962405	-	Spea_2584	-	tRNA/rRNA methyltransferase (SpoU)
2576	 46.30	0	3148503..3148772	-	89	157962406	-	Spea_2585	-	YfcL protein
2577	 47.42	0	3148901..3150022	-	373	157962407	-	Spea_2586	-	ATP-NAD/AcoX kinase
2578	 47.77	0	3150053..3151216	-	387	157962408	-	Spea_2587	-	major facilitator transporter
2579	 48.58	+1	3151216..3152310	-	364	157962409	-	Spea_2588	-	chorismate synthase
2580	 44.02	0	3152437..3153381	-	314	157962410	-	Spea_2589	-	N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
2581	 46.89	0	3153461..3153991	+	176	157962411	-	Spea_2590	-	hypothetical protein
2582	 47.77	0	3154158..3154628	-	156	157962412	-	Spea_2591	-	phosphohistidine phosphatase, SixA
2583	 42.97	0	3154976..3157765	+	929	157962413	-	Spea_2592	-	peptidase M16