IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2568	 45.82	0	3136435..3137475	+	346	157962398	-	Spea_2577	-	phosphoribosylaminoimidazole synthetase
2569	 47.60	0	3137475..3138119	+	214	157962399	-	Spea_2578	-	phosphoribosylglycinamide formyltransferase
2570	 45.48	0	3138527..3140065	-	512	157962400	-	Spea_2579	-	hypothetical protein
2571	 41.34	-1	3140202..3142163	-	653	157962401	-	Spea_2580	-	diguanylate cyclase
2572	 46.32	0	3142705..3143451	+	248	157962402	-	Spea_2581	-	UMP phosphatase
2573	 47.20	0	3143691..3145349	+	552	157962403	-	Spea_2582	-	peptidase M28
2574	 47.09	0	3146167..3147831	+	554	157962404	-	Spea_2583	-	asparagine synthetase B
2575	 50.29	+1	3147915..3148439	-	174	157962405	-	Spea_2584	-	tRNA/rRNA methyltransferase (SpoU)
2576	 46.30	0	3148503..3148772	-	89	157962406	-	Spea_2585	-	YfcL protein
2577	 47.42	0	3148901..3150022	-	373	157962407	-	Spea_2586	-	ATP-NAD/AcoX kinase
2578	 47.77	0	3150053..3151216	-	387	157962408	-	Spea_2587	-	major facilitator transporter
2579	 48.58	+