IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2560	 42.98	0	3127371..3129527	-	718	157962390	-	Spea_2569	-	prolyl oligopeptidase
2561	 45.75	0	3130162..3131031	-	289	157962391	-	Spea_2570	-	OmpA/MotB domain-containing protein
2562	 47.21	0	3131172..3131870	+	232	157962392	-	Spea_2571	-	ribonuclease T
2563	 41.41	-1	3131978..3132361	+	127	157962393	-	Spea_2572	-	transposase
2564	 43.35	0	3132478..3133206	+	242	157962394	-	Spea_2573	-	integrase catalytic region
2565	 47.19	0	3133262..3133867	-	201	157962395	-	Spea_2574	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
2566	 45.23	0	3134184..3135503	+	439	157962396	-	Spea_2575	-	Na+/H+ antiporter NhaC
2567	 44.66	0	3135588..3136214	-	208	157962397	-	Spea_2576	-	uracil phosphoribosyltransferase
2568	 45.82	0	3136435..3137475	+	346	157962398	-	Spea_2577	-	phosphoribosylaminoimidazole synthetase
2569	 47.60	0	3137475..3138119	+	214	157962399	-	Spea_2578	-	phosphoribosylglycinamide formyltransferase
2570	 45.48	0	3138527..3140065	-	512