IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2552	 42.81	0	3118298..3119458	-	386	157962382	-	Spea_2561	-	porin
2553	 42.15	0	3122035..3122760	-	241	157962383	-	Spea_2562	-	Tol-Pal system YbgF
2554	 43.70	0	3122785..3123324	-	179	157962384	-	Spea_2563	-	peptidoglycan-associated lipoprotein
2555	 46.41	0	3123349..3124671	-	440	157962385	-	Spea_2564	-	beta-propeller repeat-containing to-pal system protein TolB
2556	 47.22	0	3124681..3125616	-	311	157962386	-	Spea_2565	-	Tol-Pal system TolA
2557	 46.80	0	3125617..3126054	-	145	157962387	-	Spea_2566	-	biopolymer transport TolR
2558	 43.48	0	3126054..3126743	-	229	157962388	-	Spea_2567	-	Tol-Pal system TolQ
2559	 43.67	0	3126733..3127206	-	157	157962389	-	Spea_2568	-	Pol-Pal system-associated acyl-CoA thioesterase
2560	 42.98	0	3127371..3129527	-	718	157962390	-	Spea_2569	-	prolyl oligopeptidase
2561	 45.75	0	3130162..3131031	-	289	157962391	-	Spea_2570	-	OmpA/MotB domain-containing protein
2562	 47.21	0	3131172..3131870	+	232	157962392	-	Spea_257