IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2535	 42.03	0	3095982..3096326	+	114	157962365	-	Spea_2544	-	hypothetical protein
2536	 46.86	0	3096391..3096804	-	137	157962366	-	Spea_2545	-	hypothetical protein
2537	 42.27	0	3096901..3097314	-	137	157962367	-	Spea_2546	-	MarR family transcriptional regulator
2538	 39.41	-1	3097471..3097914	-	147	157962368	-	Spea_2547	-	hypothetical protein
2539	 45.72	0	3098005..3101055	-	1016	157962369	-	Spea_2548	-	FAD linked oxidase domain-containing protein
2540	 45.27	0	3101185..3103554	-	789	157962370	-	Spea_2549	-	phosphoenolpyruvate synthase
2541	 41.21	-1	3103681..3104493	+	270	157962371	-	Spea_2550	-	hypothetical protein
2542	 45.79	0	3104684..3105751	+	355	157962372	-	Spea_2551	-	phospho-2-dehydro-3-deoxyheptonate aldolase
2543	 40.04	-1	3106152..3106598	-	148	157962373	-	Spea_2552	-	GCN5-related N-acetyltransferase
2544	 45.92	0	3106930..3107358	+	142	157962374	-	Spea_2553	-	thioesterase superfamily protein
2545	 43.48	0	3107611..3108270	+	219	157962375