IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2529	 44.70	0	3089471..3090667	+	398	157962359	-	Spea_2538	-	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
2530	 43.69	0	3090671..3091288	+	205	157962360	-	Spea_2539	-	hypothetical protein
2531	 44.86	0	3091320..3092690	+	456	157962361	-	Spea_2540	-	adenylosuccinate lyase
2532	 43.15	0	3092865..3093995	+	376	157962362	-	Spea_2541	-	cupin 4 family protein
2533	 43.19	0	3094086..3094511	-	141	157962363	-	Spea_2542	-	hypothetical protein
2534	 45.64	0	3094774..3095805	+	343	157962364	-	Spea_2543	-	Glu/Leu/Phe/Val dehydrogenase dimerisation region
2535	 42.03	0	3095982..3096326	+	114	157962365	-	Spea_2544	-	hypothetical protein
2536	 46.86	0	3096391..3096804	-	137	157962366	-	Spea_2545	-	hypothetical protein
2537	 42.27	0	3096901..3097314	-	137	157962367	-	Spea_2546	-	MarR family transcriptional regulator
2538	 39.41	-1	3097471..3097914	-	147	157962368	-	Spea_2547	-	hypothetical protein
2539	 45.72	0	3098005..3101055	-	1016	157962369	-	S