IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2524	 37.86	-2	3084639..3084947	-	102	157962354	-	Spea_2533	-	ATP-dependent Clp protease adaptor protein ClpS
2525	 45.89	0	3085187..3085393	+	68	157962355	-	Spea_2534	-	cold-shock DNA-binding domain-containing protein
2526	 45.39	0	3085561..3087783	-	740	157962356	-	Spea_2535	-	isocitrate dehydrogenase, NADP-dependent
2527	 43.95	0	3088087..3088821	+	244	157962357	-	Spea_2536	-	pseudouridine synthase
2528	 42.83	0	3088832..3089284	+	150	157962358	-	Spea_2537	-	NUDIX hydrolase
2529	 44.70	0	3089471..3090667	+	398	157962359	-	Spea_2538	-	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
2530	 43.69	0	3090671..3091288	+	205	157962360	-	Spea_2539	-	hypothetical protein
2531	 44.86	0	3091320..3092690	+	456	157962361	-	Spea_2540	-	adenylosuccinate lyase
2532	 43.15	0	3092865..3093995	+	376	157962362	-	Spea_2541	-	cupin 4 family protein
2533	 43.19	0	3094086..3094511	-	141	157962363	-	Spea_2542	-	hypothetical protein
2534	 45.64	0	3094774..3095805	+	343