IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2511	 47.34	0	3071448..3072668	+	406	157962341	-	Spea_2520	-	cystathionine beta-lyase
2512	 46.91	0	3072832..3073413	+	193	157962342	-	Spea_2521	-	hypothetical protein
2513	 45.05	0	3073523..3074017	-	164	157962343	-	Spea_2522	-	CreA family protein
2514	 48.98	+1	3074106..3075473	-	455	157962344	-	Spea_2523	-	putative chaperone
2515	 44.72	0	3075633..3076616	-	327	157962345	-	Spea_2524	-	rhodanese domain-containing protein
2516	 44.35	0	3076901..3077626	+	241	157962346	-	Spea_2525	-	glutathione S-transferase domain-containing protein
2517	 46.53	0	3077683..3078288	-	201	157962347	-	Spea_2526	-	lysine exporter protein LysE/YggA
2518	 46.35	0	3078453..3079820	+	455	157962348	-	Spea_2527	-	transcriptional regulator
2519	 46.75	0	3079920..3080396	-	158	157962349	-	Spea_2528	-	17 kDa surface antigen
2520	 45.85	0	3080451..3081161	+	236	157962350	-	Spea_2529	-	leucyl/phenylalanyl-tRNA--protein transferase
2521	 43.53	0	3081151..3081876	+	241	157962351	-