IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2502	 42.12	0	3059563..3060438	-	291	157962332	-	Spea_2511	-	DNA ligase
2503	 44.35	0	3060701..3061072	+	123	157962333	-	Spea_2512	-	diacylglycerol kinase
2504	 42.50	0	3061478..3062350	+	290	157962334	-	Spea_2513	-	hypothetical protein
2505	 45.42	0	3063013..3064038	+	341	157962335	-	Spea_2514	-	diguanylate cyclase
2506	 44.93	0	3064166..3064855	-	229	157962336	-	Spea_2515	-	sortase family protein
2507	 46.08	0	3064855..3067224	-	789	157962337	-	Spea_2516	-	cell wall anchor domain-containing protein
2508	 48.80	+1	3067306..3068055	-	249	157962338	-	Spea_2517	-	OmpA/MotB domain-containing protein
2509	 46.46	0	3068300..3068992	+	230	157962339	-	Spea_2518	-	two component transcriptional regulator
2510	 47.83	0	3069089..3071275	+	728	157962340	-	Spea_2519	-	histidine kinase
2511	 47.34	0	3071448..3072668	+	406	157962341	-	Spea_2520	-	cystathionine beta-lyase
2512	 46.91	0	3072832..3073413	+	193	157962342	-	Spea_2521	-	hypothetical protein
2513	 45.05