IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2473	 45.78	0	3028508..3029158	+	216	157962303	-	Spea_2482	-	hypothetical protein
2474	 43.46	0	3029284..3030093	+	269	157962304	-	Spea_2483	-	hypothetical protein
2475	 44.04	0	3030090..3030995	+	301	157962305	-	Spea_2484	-	ABC transporter related
2476	 42.51	0	3031397..3031603	-	68	157962306	-	Spea_2485	-	cold-shock DNA-binding domain-containing protein
2477	 41.26	-1	3031906..3032712	-	268	157962307	-	Spea_2486	-	23S rRNA methyltransferase A
2478	 43.31	0	3033204..3034616	+	470	157962308	-	Spea_2487	-	exonuclease I
2479	 48.15	0	3034712..3035602	+	296	157962309	-	Spea_2488	-	cytidine deaminase
2480	 48.40	0	3035681..3036556	-	291	157962310	-	Spea_2489	-	6-phosphogluconate dehydrogenase NAD-binding
2481	 47.11	0	3036694..3037194	-	166	157962311	-	Spea_2490	-	thioesterase superfamily protein
2482	 40.11	-1	3037260..3037628	-	122	157962312	-	Spea_2491	-	hypothetical protein
2483	 47.46	0	3037867..3039105	-	412	157962313	-	Spea_2492	-	Beta-ketoacyl