IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2455	 43.84	0	3007082..3008185	+	367	157962285	-	Spea_2464	-	phosphoribosylaminoimidazole-succinocarboxamide synthase
2456	 41.60	-1	3008289..3008687	+	132	157962286	-	Spea_2465	-	transposase
2457	 39.71	-1	3008771..3009523	+	250	157962287	-	Spea_2466	-	integrase catalytic region
2458	 43.98	0	3009622..3010560	-	312	157962288	-	Spea_2467	-	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
2459	 46.80	0	3010638..3010934	-	98	157962289	-	Spea_2468	-	integration host factor, alpha subunit
2460	 44.97	0	3010939..3013326	-	795	157962290	-	Spea_2469	-	phenylalanyl-tRNA synthetase subunit beta
2461	 44.68	0	3013343..3014329	-	328	157962291	-	Spea_2470	-	phenylalanyl-tRNA synthetase subunit alpha
2462	 44.47	0	3014768..3016267	+	499	157962292	-	Spea_2471	-	methyl-accepting chemotaxis sensory transducer
2463	 41.14	-1	3016457..3019057	+	866	157962293	-	Spea_2472	-	putative PAS/PAC sensor protein
2464	 42.92	0	3019143..3020018	-	291	157962294	-	Spea_2473	-	hypothetical protein
2465	 35.35	-2	3020193..3020489	-	98