IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2450	 46.76	0	3002843..3003937	+	364	157962280	-	Spea_2459	-	imidazole glycerol-phosphate dehydratase/histidinol phosphatase
2451	 48.79	+1	3003934..3004677	+	247	157962281	-	Spea_2460	-	imidazole glycerol phosphate synthase subunit HisH
2452	 45.53	0	3004674..3005411	+	245	157962282	-	Spea_2461	-	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
2453	 47.16	0	3005393..3006166	+	257	157962283	-	Spea_2462	-	imidazole glycerol phosphate synthase subunit HisF
2454	 45.38	0	3006202..3006840	+	212	157962284	-	Spea_2463	-	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein
2455	 43.84	0	3007082..3008185	+	367	157962285	-	Spea_2464	-	phosphoribosylaminoimidazole-succinocarboxamide synthase
2456	 41.60	-1	3008289..3008687	+	132	157962286	-	Spea_2465	-	transposase
2457	 39.71	-1	3008771..3009523	+	250	157962287	-	Spea_2466	-	integrase catalytic region
2458	 43.98	0	3009622..3010560	-	312	157962288	-	Spea_2467	-	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase
2459	 46.80	0	3010638..3010934	-	98	157962289	-	Spea_2468	-	integration host factor, a