IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2442	 47.20	0	2994423..2995136	-	237	157962272	-	Spea_2451	-	hypothetical protein
2443	 45.31	0	2995129..2995437	-	102	157962273	-	Spea_2452	-	hypothetical protein
2444	 48.54	+1	2995486..2996202	-	238	157962274	-	Spea_2453	-	peptidase M22 glycoprotease
2445	 38.73	-1	2996567..2996992	+	141	157962275	-	Spea_2454	-	hypothetical protein
2446	 45.33	0	2996985..2998910	-	641	157962276	-	Spea_2455	-	helicase c2
2447	 44.78	0	2999471..3000370	+	299	157962277	-	Spea_2456	-	ATP phosphoribosyltransferase
2448	 49.51	+1	3000375..3001703	+	442	157962278	-	Spea_2457	-	histidinol dehydrogenase
2449	 46.78	0	3001700..3002755	+	351	157962279	-	Spea_2458	-	histidinol-phosphate aminotransferase
2450	 46.76	0	3002843..3003937	+	364	157962280	-	Spea_2459	-	imidazole glycerol-phosphate dehydratase/histidinol phosphatase
2451	 48.79	+1	3003934..3004677	+	247	157962281	-	Spea_2460	-	imidazole glycerol phosphate synthase subunit HisH
2452	 45.53	0	3004674..3005411	+	245	1579