IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2417	 46.09	0	2963902..2964387	-	161	157962247	-	Spea_2426	-	nitrate reductase cytochrome c-type subunit (NapB)
2418	 47.95	0	2964400..2966889	-	829	157962248	-	Spea_2427	-	nitrate reductase
2419	 40.70	-1	2966892..2967149	-	85	157962249	-	Spea_2428	-	NapD family protein
2420	 41.51	-1	2967190..2967348	-	52	157962250	-	Spea_2429	-	periplasmic nitrate reductase NapE
2421	 46.42	0	2968293..2972180	-	1295	157962251	-	Spea_2430	-	ATP-dependent helicase HrpA
2422	 46.76	0	2972383..2972799	-	138	157962252	-	Spea_2431	-	signal transduction protein
2423	 35.49	-2	2972942..2973544	-	200	157962253	-	Spea_2432	-	hypothetical protein
2424	 44.30	0	2973836..2974291	-	151	157962254	-	Spea_2433	-	xanthine-guanine phosphoribosyltransferase
2425	 43.07	0	2974579..2974917	-	112	157962255	-	Spea_2434	-	hypothetical protein
2426	 47.05	0	2975127..2976212	-	361	157962256	-	Spea_2435	-	asparaginase
2427	 43.84	0	2976381..2978207	+	608	157962257	-	Spea_2436	-	surface ant