IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2407	 47.37	0	2946946..2947857	+	303	157962237	-	Spea_2416	-	ATPase
2408	 46.02	0	2947930..2948946	+	338	157962238	-	Spea_2417	-	hypothetical protein
2409	 47.83	0	2948943..2951012	+	689	157962239	-	Spea_2418	-	transglutaminase domain-containing protein
2410	 48.16	0	2951072..2954881	+	1269	157962240	-	Spea_2419	-	exodeoxyribonuclease V, gamma subunit
2411	 47.97	0	2954883..2958599	+	1238	157962241	-	Spea_2420	-	exodeoxyribonuclease V, beta subunit
2412	 48.02	0	2958596..2960590	+	664	157962242	-	Spea_2421	-	exodeoxyribonuclease V, alpha subunit
2413	 44.08	0	2960862..2961866	+	334	157962243	-	Spea_2422	-	D-alanyl-alanine synthetase A
2414	 39.71	-1	2961950..2962702	-	250	157962244	-	Spea_2423	-	integrase catalytic region
2415	 41.60	-1	2962786..2963184	-	132	157962245	-	Spea_2424	-	transposase
2416	 46.00	0	2963294..2963893	-	199	157962246	-	Spea_2425	-	NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome
2417	 46.09	0	2963902..2964387	-	161