IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2397	 43.43	0	2934626..2935417	+	263	157962227	-	Spea_2406	-	hydroxyacylglutathione hydrolase
2398	 46.35	0	2935508..2937067	+	519	157962228	-	Spea_2407	-	lytic transglycosylase catalytic
2399	 46.81	0	2937132..2937695	-	187	157962229	-	Spea_2408	-	intracellular proteinase inhibitor domain-containing protein
2400	 43.77	0	2937695..2939533	-	612	157962230	-	Spea_2409	-	AsmA family protein
2401	 42.37	0	2939618..2940115	-	165	157962231	-	Spea_2410	-	regulator of ribonuclease activity A
2402	 33.33	-2	2940303..2940620	+	105	157962232	-	Spea_2411	-	hypothetical protein
2403	 38.57	-2	2941156..2941785	-	209	157962233	-	Spea_2412	-	putative sulfite oxidase subunit YedZ
2404	 44.48	0	2941830..2942852	-	340	157962234	-	Spea_2413	-	putative sulfite oxidase subunit YedY
2405	 42.78	0	2943067..2944590	+	507	157962235	-	Spea_2414	-	hypothetical protein
2406	 44.88	0	2944618..2946549	+	643	157962236	-	Spea_2415	-	lytic transglycosylase catalytic
2407	 47.37	0	2946946..2947857	+	303