IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2387	 45.87	0	2920584..2920958	-	124	157962217	-	Spea_2396	-	hypothetical protein
2388	 43.70	0	2921392..2922684	-	430	157962218	-	Spea_2397	-	putative serine transporter
2389	 38.91	-1	2923555..2925525	+	656	157962219	-	Spea_2398	-	methyl-accepting chemotaxis sensory transducer
2390	 39.21	-1	2925949..2926629	-	226	157962220	-	Spea_2399	-	hypothetical protein
2391	 46.22	0	2926979..2928856	-	625	157962221	-	Spea_2400	-	sodium/hydrogen exchanger
2392	 44.57	0	2930138..2931472	-	444	157962222	-	Spea_2401	-	hypothetical protein
2393	 44.58	0	2931483..2932211	-	242	157962223	-	Spea_2402	-	DNA polymerase III, epsilon subunit
2394	 46.77	0	2932212..2932769	+	185	157962224	-	Spea_2403	-	ribonuclease H
2395	 46.71	0	2932842..2933738	-	298	157962225	-	Spea_2404	-	LysR family transcriptional regulator
2396	 45.75	0	2933747..2934487	-	246	157962226	-	Spea_2405	-	methyltransferase type 11
2397	 43.43	0	2934626..2935417	+	263	157962227	-	Spea_2406	-	hydroxyacy