IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2379	 46.81	0	2910896..2912617	+	573	157962209	-	Spea_2388	-	major facilitator transporter
2380	 42.41	0	2912789..2913460	-	223	157962210	-	Spea_2389	-	hypothetical protein
2381	 49.72	+1	2913671..2914024	+	117	157962211	-	Spea_2390	-	methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding
2382	 45.80	0	2914046..2914831	+	261	157962212	-	Spea_2391	-	hypothetical protein
2383	 44.27	0	2914909..2915694	-	261	157962213	-	Spea_2392	-	glutamine amidotransferase class-II
2384	 47.39	0	2915939..2918386	+	815	157962214	-	Spea_2393	-	acyl-CoA dehydrogenase
2385	 41.72	-1	2918541..2919827	-	428	157962215	-	Spea_2394	-	coproporphyrinogen dehydrogenase
2386	 50.81	+1	2920216..2920587	-	123	157962216	-	Spea_2395	-	hypothetical protein
2387	 45.87	0	2920584..2920958	-	124	157962217	-	Spea_2396	-	hypothetical protein
2388	 43.70	0	2921392..2922684	-	430	157962218	-	Spea_2397	-	putative serine transporter
2389	 38.91	-1	2923555..2925525	+	656	157962219	-