IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2374	 47.75	0	2904901..2906904	-	667	157962204	-	Spea_2383	-	thiamine biosynthesis protein ThiC
2375	 41.67	-1	2907380..2908291	-	303	157962205	-	Spea_2384	-	hypothetical protein
2376	 41.07	-1	2908535..2909284	+	249	157962206	-	Spea_2385	-	hemolysin III family channel protein
2377	 46.90	0	2909344..2909859	-	171	157962207	-	Spea_2386	-	DTW domain-containing protein
2378	 43.70	0	2910137..2910628	-	163	157962208	-	Spea_2387	-	peptide deformylase
2379	 46.81	0	2910896..2912617	+	573	157962209	-	Spea_2388	-	major facilitator transporter
2380	 42.41	0	2912789..2913460	-	223	157962210	-	Spea_2389	-	hypothetical protein
2381	 49.72	+1	2913671..2914024	+	117	157962211	-	Spea_2390	-	methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding
2382	 45.80	0	2914046..2914831	+	261	157962212	-	Spea_2391	-	hypothetical protein
2383	 44.27	0	2914909..2915694	-	261	157962213	-	Spea_2392	-	glutamine amidotransferase class-II
2384	 47.39	0	2915939..2918386	+	815