IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2367	 46.18	0	2898952..2899200	-	82	157962197	-	Spea_2376	-	methyl-accepting chemotaxis protein
2368	 42.70	0	2899423..2899785	+	120	157962198	-	Spea_2377	-	response regulator receiver protein
2369	 47.34	0	2900354..2901460	-	368	157962199	-	Spea_2378	-	thiamine biosynthesis protein ThiH
2370	 51.24	+1	2901488..2902252	-	254	157962200	-	Spea_2379	-	thiazole biosynthesis family protein
2371	 44.02	0	2902254..2902487	-	77	157962201	-	Spea_2380	-	thiamine biosynthesis protein ThiS
2372	 47.67	0	2902480..2903316	-	278	157962202	-	Spea_2381	-	UBA/THIF-type NAD/FAD binding protein
2373	 47.71	0	2903306..2904898	-	530	157962203	-	Spea_2382	-	phosphomethylpyrimidine kinase
2374	 47.75	0	2904901..2906904	-	667	157962204	-	Spea_2383	-	thiamine biosynthesis protein ThiC
2375	 41.67	-1	2907380..2908291	-	303	157962205	-	Spea_2384	-	hypothetical protein
2376	 41.07	-1	2908535..2909284	+	249	157962206	-	Spea_2385	-	hemolysin III family channel protein
2377	 46.90	0	2909344..2909859	-	171