IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2345	 47.89	0	2869810..2870379	+	189	157962175	-	Spea_2354	-	electron transport complex, RnfABCDGE type, B subunit
2346	 47.30	0	2870373..2872850	+	825	157962176	-	Spea_2355	-	electron transport complex protein RnfC
2347	 47.39	0	2872854..2873906	+	350	157962177	-	Spea_2356	-	electron transport complex, RnfABCDGE type, D subunit
2348	 42.79	0	2873937..2874560	+	207	157962178	-	Spea_2357	-	electron transport complex protein RnfG
2349	 45.83	0	2874557..2875252	+	231	157962179	-	Spea_2358	-	SoxR-reducing system protein RsxE
2350	 46.26	0	2875294..2875935	+	213	157962180	-	Spea_2359	-	endonuclease III
2351	 46.47	0	2876595..2877005	+	136	157962181	-	Spea_2360	-	lactoylglutathione lyase
2352	 43.26	0	2877064..2879673	-	869	157962182	-	Spea_2361	-	TonB-dependent receptor
2353	 45.86	0	2880551..2881564	-	337	157962183	-	Spea_2362	-	Holliday junction DNA helicase B
2354	 43.69	0	2881574..2882191	-	205	157962184	-	Spea_2363	-	Holliday junction DNA helicase RuvA
2355	 48.28	0	2882188..2882709	-	173