IslandPathversion 1.0

IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 45.18 STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2342	 45.66	0	2863253..2865256	-	667	157962172	-	Spea_2351	-	excinuclease ABC subunit B
2343	 40.11	-1	2867204..2869120	+	638	157962173	-	Spea_2352	-	diguanylate cyclase/phosphodiesterase
2344	 44.56	0	2869229..2869807	+	192	157962174	-	Spea_2353	-	Na(+)-translocating NADH-quinone reductase subunit E
2345	 47.89	0	2869810..2870379	+	189	157962175	-	Spea_2354	-	electron transport complex, RnfABCDGE type, B subunit
2346	 47.30	0	2870373..2872850	+	825	157962176	-	Spea_2355	-	electron transport complex protein RnfC
2347	 47.39	0	2872854..2873906	+	350	157962177	-	Spea_2356	-	electron transport complex, RnfABCDGE type, D subunit
2348	 42.79	0	2873937..2874560	+	207	157962178	-	Spea_2357	-	electron transport complex protein RnfG
2349	 45.83	0	2874557..2875252	+	231	157962179	-	Spea_2358	-	SoxR-reducing system protein RsxE
2350	 46.26	0	2875294..2875935	+	213	157962180	-	Spea_2359	-	endonuclease III
2351	 46.47	0	2876595..2877005	+	136	157962181	-	Spea_2360	-	lactoylglutathione lyase
2352	 43.26	0	2877064..2879673	-	869