IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2333	 40.85	-1	2854089..2854673	+	194	157962163	-	Spea_2342	-	hypothetical protein
2334	 40.42	-1	2854760..2855239	+	159	157962164	-	Spea_2343	-	SecC motif-containing protein
2335	 41.98	0	2855384..2857558	-	724	157962165	-	Spea_2344	-	diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
2336	 38.19	-2	2857686..2857973	-	95	157962166	-	Spea_2345	-	hypothetical protein
2337	 43.84	0	2858049..2858600	-	183	157962167	-	Spea_2346	-	hypothetical protein
2338	 44.66	0	2859892..2860968	+	358	157962168	-	Spea_2347	-	pyridoxal-5'-phosphate-dependent protein beta subunit
2339	 44.39	0	2861089..2861757	-	222	157962169	-	Spea_2348	-	radical SAM domain-containing protein
2340	 44.44	0	2861885..2862568	+	227	157962170	-	Spea_2349	-	exsB protein
2341	 44.78	0	2862562..2863164	+	200	157962171	-	Spea_2350	-	rhomboid family protein
2342	 45.66	0	2863253..2865256	-	667	157962172	-	Spea_2351	-	excinuclease ABC subunit B
2343	 40.11	-1	2867204..2869120	+	638