IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2328	 47.46	0	2846735..2848171	+	478	157962158	-	Spea_2337	-	pyruvate kinase
2329	 45.73	0	2848256..2850538	-	760	157962159	-	Spea_2338	-	acyl-CoA dehydrogenase
2330	 43.98	0	2850544..2851191	-	215	157962160	-	Spea_2339	-	TetR family transcriptional regulator
2331	 45.62	0	2851374..2853212	+	612	157962161	-	Spea_2340	-	peptidyl-dipeptidase A
2332	 45.69	0	2853331..2853921	-	196	157962162	-	Spea_2341	-	Smr protein/MutS2
2333	 40.85	-1	2854089..2854673	+	194	157962163	-	Spea_2342	-	hypothetical protein
2334	 40.42	-1	2854760..2855239	+	159	157962164	-	Spea_2343	-	SecC motif-containing protein
2335	 41.98	0	2855384..2857558	-	724	157962165	-	Spea_2344	-	diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
2336	 38.19	-2	2857686..2857973	-	95	157962166	-	Spea_2345	-	hypothetical protein
2337	 43.84	0	2858049..2858600	-	183	157962167	-	Spea_2346	-	hypothetical protein
2338	 44.66	0	2859892..2860968	+	358	157962168	-	Spea_2347	-	pyridoxal