IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2322	 41.41	-1	2840208..2840591	-	127	157962152	-	Spea_2331	-	transposase
2323	 44.91	0	2840688..2841335	-	215	157962153	-	Spea_2332	-	keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
2324	 48.66	+1	2841357..2843183	-	608	157962154	-	Spea_2333	-	phosphogluconate dehydratase
2325	 44.96	0	2843193..2843897	-	234	157962155	-	Spea_2334	-	6-phosphogluconolactonase
2326	 45.16	0	2843908..2845404	-	498	157962156	-	Spea_2335	-	glucose-6-phosphate 1-dehydrogenase
2327	 43.74	0	2845696..2846550	+	284	157962157	-	Spea_2336	-	DNA-binding transcriptional regulator HexR
2328	 47.46	0	2846735..2848171	+	478	157962158	-	Spea_2337	-	pyruvate kinase
2329	 45.73	0	2848256..2850538	-	760	157962159	-	Spea_2338	-	acyl-CoA dehydrogenase
2330	 43.98	0	2850544..2851191	-	215	157962160	-	Spea_2339	-	TetR family transcriptional regulator
2331	 45.62	0	2851374..2853212	+	612	157962161	-	Spea_2340	-	peptidyl-dipeptidase A
2332	 45.69	0	2853331..2853921	-	196	157