IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2316	 43.11	0	2833701..2834753	-	350	157962146	-	Spea_2325	-	diguanylate cyclase
2317	 41.91	0	2834856..2836499	-	547	157962147	-	Spea_2326	-	sulfatase
2318	 41.67	-1	2836841..2837260	-	139	157962148	-	Spea_2327	-	MarR family transcriptional regulator
2319	 42.74	0	2837287..2838264	-	325	157962149	-	Spea_2328	-	cation diffusion facilitator family transporter
2320	 40.89	-1	2838728..2839309	+	193	157962150	-	Spea_2329	-	ecotin precursor
2321	 43.62	0	2839363..2840091	-	242	157962151	-	Spea_2330	-	integrase catalytic region
2322	 41.41	-1	2840208..2840591	-	127	157962152	-	Spea_2331	-	transposase
2323	 44.91	0	2840688..2841335	-	215	157962153	-	Spea_2332	-	keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
2324	 48.66	+1	2841357..2843183	-	608	157962154	-	Spea_2333	-	phosphogluconate dehydratase
2325	 44.96	0	2843193..2843897	-	234	157962155	-	Spea_2334	-	6-phosphogluconolactonase
2326	 45.16	0	2843908..2845404	-	498	157962156	-	Spea