IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2307	 38.96	-1	2819088..2820437	-	449	157962137	-	Spea_2316	-	putative orphan protein
2308	 37.97	-2	2820440..2822035	-	531	157962138	-	Spea_2317	-	hypothetical protein
2309	 46.86	0	2822648..2822950	-	100	157962139	-	Spea_2318	-	hypothetical protein
2310	 51.13	+1	2823102..2824382	-	426	157962140	-	Spea_2319	-	putative AcnD-accessory protein PrpF
2311	 50.27	+1	2824628..2827267	-	879	157962141	-	Spea_2320	-	aconitate hydratase
2312	 48.14	0	2827508..2828662	-	384	157962142	-	Spea_2321	-	2-methylcitrate synthase/citrate synthase II
2313	 49.15	+1	2828831..2829709	-	292	157962143	-	Spea_2322	-	2-methylisocitrate lyase
2314	 46.30	0	2829873..2830535	-	220	157962144	-	Spea_2323	-	GntR family transcriptional regulator
2315	 47.50	0	2830886..2833582	+	898	157962145	-	Spea_2324	-	GCN5-related N-acetyltransferase
2316	 43.11	0	2833701..2834753	-	350	157962146	-	Spea_2325	-	diguanylate cyclase
2317	 41.91	0	2834856..2836499	-	547	157962147	-	Spea_2326	-	su