IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2299	 42.28	0	2804463..2804831	+	122	157962129	-	Spea_2308	-	hypothetical protein
2300	 34.62	-2	2804938..2807730	-	930	157962130	-	Spea_2309	-	sigma-70 region 4 domain-containing protein
2301	 38.24	-2	2807742..2808128	-	128	157962131	-	Spea_2310	-	hypothetical protein
2302	 35.68	-2	2808131..2809195	-	354	157962132	-	Spea_2311	-	hypothetical protein
2303	 35.38	-2	2809332..2810114	-	260	157962133	-	Spea_2312	-	hypothetical protein
2304	 39.70	-1	2810301..2812421	-	706	157962134	-	Spea_2313	-	type III restriction protein res subunit
2305	 39.31	-1	2812791..2813660	-	289	157962135	-	Spea_2314	-	HNH nuclease
2306	 42.01	0	2813885..2819116	-	1743	157962136	-	Spea_2315	-	hypothetical protein
2307	 38.96	-1	2819088..2820437	-	449	157962137	-	Spea_2316	-	putative orphan protein
2308	 37.97	-2	2820440..2822035	-	531	157962138	-	Spea_2317	-	hypothetical protein
2309	 46.86	0	2822648..2822950	-	100	157962139	-	Spea_2318	-	hypothetical protein
2310	 51.13	+