IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2283	 46.00	0	2777679..2780669	-	996	157962113	-	Spea_2292	-	UvrD/REP helicase
2284	 40.17	-1	2781046..2781396	+	116	157962114	-	Spea_2293	-	hypothetical protein
2285	 44.41	0	2781639..2782721	+	360	157962115	-	Spea_2294	-	hypothetical protein
2286	 48.86	+1	2782955..2784538	+	527	157962116	-	Spea_2295	-	glutathione synthase
2287	 45.78	0	2784744..2787185	-	813	157962117	-	Spea_2296	-	hypothetical protein
2288	 44.60	0	2787185..2787814	-	209	157962118	-	Spea_2297	-	hypothetical protein
2289	 44.79	0	2787978..2791259	+	1093	157962119	-	Spea_2298	-	histidine kinase
2290	 44.74	0	2791252..2791917	+	221	157962120	-	Spea_2299	-	two component LuxR family transcriptional regulator
2291	 48.87	+1	2792348..2794168	+	606	157962121	-	Spea_2300	-	peptidase S8 and S53 subtilisin kexin sedolisin
2292	 40.48	-1	2794293..2795201	-	302	157962122	-	Spea_2301	-	hypothetical protein
2293	 42.14	0	2795304..2795882	+	192	157962123	-	Spea_2302	-	hypothetical protein
2294