IslandPath Analysis: Shewanella pealeana ATCC 700345



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 45.18   STD DEV: 3.28
Shewanella pealeana ATCC 700345, complete genome - 1..5174581
4241 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2270	 43.13	0	2760829..2762043	-	404	157962100	-	Spea_2279	-	major facilitator transporter
2271	 43.98	0	2762438..2762935	-	165	157962101	-	Spea_2280	-	hypothetical protein
2272	 40.00	-1	2763350..2763874	+	174	157962102	-	Spea_2281	-	YdaE
2273	 43.41	0	2763910..2764911	-	333	157962103	-	Spea_2282	-	periplasmic binding protein/LacI transcriptional regulator
2274	 47.50	0	2764984..2766021	-	345	157962104	-	Spea_2283	-	monosaccharide-transporting ATPase
2275	 42.42	0	2766032..2767516	-	494	157962105	-	Spea_2284	-	ABC transporter related
2276	 49.87	+1	2767509..2769026	-	505	157962106	-	Spea_2285	-	xylulokinase
2277	 47.54	0	2769030..2770064	-	344	157962107	-	Spea_2286	-	alcohol dehydrogenase
2278	 42.63	0	2770396..2771385	+	329	157962108	-	Spea_2287	-	LacI family transcription regulator
2279	 44.69	0	2771705..2773315	+	536	157962109	-	Spea_2288	-	ABC transporter related
2280	 46.70	0	2773448..2774098	-	216	157962110	-	Spea_2289	-	hexapaptide repeat-c